Grabowicz Lab Useful web resources

Emory Resources

Health and Safety Office (EHSO) Contacts
For spill assistance, call 404-727-2888

Facilities - submit facilities requests

Databases

EcoCyc - the encyclopedia of E. coli
Kegg - genomics databases
String-DB - at-a-glance gene association database
PDB (Protein Data Bank) - protein structure database
InterPro - protein domain database
MemProtDB - molecular dynamics simulations of membrane proteins
HHblits - homology search
I-Tasser - structure prediction
Gremlin - structure prediction (with co-evolution)
Robetta - structure prediction
AlphaFold - predicted structure database
AlphaFold3 - prediction server


Technical Resources

NEB Tm calculator - PCR workflow
NEB Double Digest Finder - Traditional cloning workflow
NEBcloner - Traditional cloning workflow
NEBuilder - Gibson assembly workflow
NEB Golde Gate - Golden Gate cloning workflow


Software

Endnote - reference manager available from Emory
ChimeraX - structure viewer
Enzyme X (Mac) - cloning software
4Peaks (Mac) - Sanger sequencing viewer